This can't be done as part of the msi install.
However if you are deploying using SCCM or some other centralized deployment tool you can copy an AnyConnect VPN profile (xml file created with the stand alone VPN profile editor or from ASDM) to the hidden (by default in Windows) profiles folder (i.e., C:\ProgramData\Cisco\Cisco AnyConnect Secure Mobility Client\Profile).
Here's a basic one that you can customize for use (modify the elements I highlighted in red):
<?xml version="1.0" encoding="UTF-8"?>
<AnyConnectProfile xmlns="http://schemas.xmlsoap.org/encoding/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://schemas.xmlsoap.org/encoding/ AnyConnectProfile.xsd">
<ClientInitialization>
<UseStartBeforeLogon UserControllable="true">false</UseStartBeforeLogon>
<AutomaticCertSelection UserControllable="true">true</AutomaticCertSelection>
<ShowPreConnectMessage>false</ShowPreConnectMessage>
<CertificateStore>All</CertificateStore>
<CertificateStoreMac>All</CertificateStoreMac>
<CertificateStoreLinux>All</CertificateStoreLinux>
<CertificateStoreOverride>false</CertificateStoreOverride>
<ProxySettings>Native</ProxySettings>
<AllowLocalProxyConnections>false</AllowLocalProxyConnections>
<AuthenticationTimeout>30</AuthenticationTimeout>
<AutoConnectOnStart UserControllable="true">false</AutoConnectOnStart>
<MinimizeOnConnect UserControllable="true">true</MinimizeOnConnect>
<LocalLanAccess UserControllable="true">false</LocalLanAccess>
<DisableCaptivePortalDetection UserControllable="false">false</DisableCaptivePortalDetection>
<ClearSmartcardPin UserControllable="true">true</ClearSmartcardPin>
<IPProtocolSupport>IPv4,IPv6</IPProtocolSupport>
<AutoReconnect UserControllable="false">true
<AutoReconnectBehavior UserControllable="false">ReconnectAfterResume</AutoReconnectBehavior>
</AutoReconnect>
<SuspendOnConnectedStandby>false</SuspendOnConnectedStandby>
<AutoUpdate UserControllable="false">true</AutoUpdate>
<RSASecurIDIntegration UserControllable="false">Automatic</RSASecurIDIntegration>
<WindowsLogonEnforcement>SingleLocalLogon</WindowsLogonEnforcement>
<LinuxLogonEnforcement>SingleLocalLogon</LinuxLogonEnforcement>
<WindowsVPNEstablishment>LocalUsersOnly</WindowsVPNEstablishment>
<LinuxVPNEstablishment>LocalUsersOnly</LinuxVPNEstablishment>
<AutomaticVPNPolicy>false</AutomaticVPNPolicy>
<PPPExclusion UserControllable="false">Automatic
<PPPExclusionServerIP UserControllable="false"></PPPExclusionServerIP>
</PPPExclusion>
<EnableScripting UserControllable="false">false</EnableScripting>
<EnableAutomaticServerSelection UserControllable="true">false
<AutoServerSelectionImprovement>20</AutoServerSelectionImprovement>
<AutoServerSelectionSuspendTime>4</AutoServerSelectionSuspendTime>
</EnableAutomaticServerSelection>
<RetainVpnOnLogoff>false
</RetainVpnOnLogoff>
<CaptivePortalRemediationBrowserFailover>false</CaptivePortalRemediationBrowserFailover>
<AllowManualHostInput>true</AllowManualHostInput>
</ClientInitialization>
<ServerList>
<HostEntry>
<HostName>User-friendly name here</HostName>
<HostAddress>FQDN of VPN headend</HostAddress>
</HostEntry>
</ServerList>
</AnyConnectProfile>
